All functions
|
addSeq
|
Return sequences for the exon pairs |
bcl6exons
|
Exon structure of BCL6 transcripts |
design
|
Run primer design |
diagnose
|
Returns diagnostics information from the run |
extractExonPairs
|
Get exon pairs |
p3Settings
|
Get/define Primer3 settings |
p3Version
|
Get Primer3 version |
plotSegments
|
Plot exon structure |
primerSize
|
Set primer size |
primersToList
|
Split primers GRanges into a list by their direction |
primerTm
|
Set ptimer melting temperatures |
productSize
|
Set product size |
runPrimer3
|
Invokes Primer3 for a given list of options |
selectPairs
|
Given a list of exons returns candidates for primer design |
seqSettings
|
A helper to define template parameters |
toGRanges
|
Transforms output of design to GRanges |