Sci-ModoM: The quantitative database of transcriptome-wide high-throughput RNA modification sites

Introduction

Sci-ModoM is a quantitative database of RNA modifications dedicated to novel assays that provide transcriptome-wide information at single-base resolution.

The user guide is primarily intended to serve as a maintainer’s documentation and to assist developers in familiarizing with the data model. It also serves as a detailed resource for users who need in-depth information.

This is the official documentation for the bedRMod format specification.

• Sci-ModoM documentation
  • Installation
  • Container setup
  • Data model and design
  • Flask CLI
• bedRMod format
  • The bedRMod format specification
  • Notes